Skip to main content

Table 3 Detection and identification of F17 genes variants and virulence-associated genes in the collection of E . coli isolates from feces of calves with diarrhea in Iran

From: Identification and detection of three new F17 fimbrial variants in Escherichia coli strains isolated from cattle

Isolate Herd Sampling date Serogroup Phylogroup F17A F17a-A F17b-A F17c-A F17d-A F17e-A F17-G1 F17-G2 Other virulence-associated genes
2 1 March-04 - B1-1          
10 March-04 - B1-1 +      +   +  
30 May-04 - B1-1 +      +   +  
44 May-04 O8 B1-1          
38 May-04 - B1-1 +      +   +  
49 June-04 - B1-1          
52 June-04 O8 B1-1          
64 March-05 O157 A-1          afaE-VIII, iucD
16 2 April-04 - B1-1          
68 April-05 - B1-1 +    +     + iucD
73 June-05 - D-1          afaE-VIII, clpG, iucD
45 3 May-04 - B1-1          
57 June-04 O15 B1-1 +   +     +   
4 4 March-04 O8 B1-1          
3 March-04 O8 B1-1          
29 April-04 - B1-1 +      +   +  
56 June-04 O8 A-1          afaE-VIII, iucD
25 5 April-04 - B1-1 + +       +  
35 May-04 - B1-1 + +       +  
63 March-05 O49 B1-1          
5 6 March-04 - B1-1 +      +   +  
26 April-04 - B1-1 +      +   +  
28 April-04 O101 B1-1 +      +   +  
32 May-04 - B1-1 +      +   +  
51 June-04 O141 B1-1          
54 June-04 - B1-1          
9 7 March-04 - B1-1 +      +   +  
11 March-04 O8 B1-1 +    +     + iucD
14 March-04 - B1-1 +      +   +  
46 May-04 - B1-1 +      +   + cnf2, cdtIII
43 May-04 O8 B1-1          
33 May-04 - B1-1 +      +   + cnf2, cdtIII
66 March-05 O8 A-2          
69 April-05 O8 A-2          
75 June-05 O8 B1-1 +    +     + iucD
74 June-05 O8 B1-1 +    +     +  
19 8 April-04 - B1-1 +      +   +  
34 May-04 - B1-1 +      +   +  
47 May-04 - B1-1 +      +   +  
48 June-04 - B1-1 +      +   + stI, ltI
53 June-04 - A-1          iucD
59 June-04 - B1-1          
62 March-05 - B1-1          
65 March-05 - D-1          hly
71 April-05 O8 B1-1          
39 9 May-04 O15 B1-1 +      +   +  
31 May-04 - B1-1          
60 June-04 O49 B1-1          
70 April-05 - A-1          
27 10 April-04 O8 B1-1          
20 April-04 - B1-1 +      +   +  
24 April-04 - B1-1 +      +   +  
37 May-04 O8 B1-1          
41 May-04 O8 B1-1          
50 June-04 - B1-1 +      +   +  
72 April-05 O15 B1-1 +     +   +   
55 11 June-04 - D-1          stI, ltI
61 June-04 - A-2          hly