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Table 2 Comparison of % deduced amino acid sequence identity of S-01 and other viruses

From: Isolation and characterization of a subtype C avian metapneumovirus circulating in Muscovy ducks in China

 

Size of

Percentage predicted amino acid identity and genome nucleotide identity (%)#

Name*

nta

aab

aMPV-A

aMPV-B

aMPV-C

aMPV-D

hMPV

RSV

BRSV

MPV

HRSV

N

1185

394

70.9-73.7

71.2-71.7

99.0

73.7

89.1-89.9

40.1

40.8

43.5

40.6

P

885

294

56.1-56.8

55.6-55.9

95.3-96.6

/

66.4-67.8

30.7

31.1

27.6

32.0

M

765

254

78.0

77.3-78.8

98.4-99.6

/

87.8

37.6

36.5

39.0

38.0

F

1614

537

72.3-73

72.7-72.9

98.5-99.1

/

81.6-81.8

36.5

38.2

39.8

37.1

M2-1

555

184

71.9-72.4

74.6

98.4

/

83.8-84.9

38.9

37.7

36.8

37.8

M2-2

216

71

22.2-23.6

20.8

94.4-97.2

/

56.9-58.3

19.4

22.2

8.6

22.0

SH

528

175

18.3

18.8

86.9-89.2

/

27.4-29.1

15.4

9.8

13.6

9.7

G

1758

585

14.8-15.1

15.2-15.9

60.6-82.8

17.7

21.9-25.3

15.4

12.8

7.8

18.2

L

6018

2005

62.4

62.3-62.4

95.2-96.1

/

77.6-78.2

46.0

46.3

48.7

46.1

Genome

14079

/

60.4

60.2

92.3-94.3

/

69.6-70.4

46.6

46.2

46.1

46.4

  1. aNucleotides. bAmino acid; *N: Nucleocapsid, P: Phosphoprotein, M: Matrix protein, F: Fusion protein, M2-1: Second matrix-1, M2-2: Second matrix-2, SH: Small hydrophobic;G: Glycoprotein, L: Large polymerase; Genome: S-01 complete genome. #Genbank accession number of S01 is KF364615. The evolutionary trend of S-01 was analyzed based on nucleotide sequences of aMPV-A/FJ796703, aMPV-A/JF424833, aMPV-A/AY640137, aMPV-A/L34030, aMPV-A/DQ666911, aMPV-B/AB548428, aMPV-B/L34033, aMPV-B/JN651915, aMPV-C/AJ811991, aMPV-C/AJ811992, aMPV-C/NC0077652, aMPV-C/DQ009484, aMPV-C /AY579780, aMPV-C/AY590688, aMPV-C/EF199771, aMPV-C/EF-199772, aMPV-C/FJ977568, aMPV-D /AJ251085, hMPV/DQ843658, hMPV/EF535506, hMPV/HM197719, hMPV/AY525843, hMPV/AF371337, hMPV/AB503857, hMPV/JN184400, hMPV/GQ153651, hMPV/KC562243, hMPV/KC562233, hMPV/DQ843659, RSV/FJ614813, BRSV/AF295543, MPV/AY729016 and HRSV/JQ582843.