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Table 4 Differential expression of the selected gene set in abomasal mucosa (AFM) and draining lymph node (ALN)

From: Functional investigation of a QTL affecting resistance to Haemonchus contortus in sheep

Tissue Gene FC Ri vs Ni FC Ri vs Ru FC Ni vs Nu FC Ru vs Nu
AFM IL4 4.07* 2.22 0.54 1.16
IL13 4.51** 4.79* 1.06 0.93
IFNγ 0.83 1.13 1.36 1.47
TNFα 0.85 0.63 0.74 1.23
LGALS15 7.02 576* 82.0* 0.60
ITLN2 6.97 22.4 3.22 4.94
TFF3 1.61 6.86* 4.26 1.50
CCL26 Not tested in this tissue
TNFRSF4 Not tested in this tissue
CXCL14 Not tested in this tissue
PAPPA2 1.18 0.34 0.29* 1.08
ALN IL4 1.22 2.33* 1.91 0.81
IL13 1.24 0.50 0.41 0.78
IFNγ 0.69 0.33** 0.48 1.08
TNFα 0.70* 0.62 0.88 1.12
LGALS15 Not tested in this tissue
ITLN2 Not tested in this tissue
TFF3 Not tested in this tissue
CCL26 1.65 1.13 0.69 0.87
TNFRSF4 0.68 0.59 0.87 1.11
CXCL14 1.45 1.56 1.08 0.44
PAPPA2 1.06 0.52 0.49* 0.88
  1. Fold changes (FC) between the four considered groups (resistant allele carriers infected and uninfected (Ri and Ru respectively) and susceptible allele carriers infected and uninfected (Ni and Nu respectively) are provided. Significant differences (nominal p-value < 0.01) are indicated with **, and suggestive differences (nominal p-value < 0.05) are marked as *.