Table 3 Summary of mRNA expression in TXhfq (in comparison with that in TX01) as determined by qRT-PCR

1

rpsA gene product [Edwardsiella tarda EIB202]: 30S ribosomal protein S1

Down (0.42 ± 0.05)

Unchanged

2

hypothetical protein1 [Edwardsiella tarda EIB202]:

Down (-∞)

Down (0.38 ± 0.06)

3

tuf2 gene product [Edwardsiella tarda EIB202]: elongation factor Tu

Down (0.35 ± 0.09)

Unchanged

4

Putative carbamoyltransferase YgeW [Edwardsiella tarda ATCC 23685]

Down (0.21 ± 0.12)

Down (0.42 ± 0.09)

5

Mrp(Multiple Resistance and pH adaptation) protein [Edwardsiella tarda FL6-60]

Up (2.81 ± 1.11)

Up (4.11 ± 0.85)

6

tsf gene product [Edwardsiella tarda EIB202]: translation elongation factor Ts

Down (0.45 ± 0.07)

Unchanged

7

Dyp-type peroxidase family protein [Edwardsiella tarda EIB202]

Up (3.62 ± 0.78)

Up (7.72 ± 1.08)

8

ybaS gene product [Edwardsiella tarda EIB202]: glutaminase

Down (-∞)

Down (0.20 ± 0.07)

9

Hypothetical protein [Edwardsiella tarda EIB202]: lysophospholipase

Up (3.21 ± 1.28)

Up (5.10 ± 0.84)

10

fkpA gene product [Edwardsiella tarda EIB202]: FKBP-type peptidyl-prolyl cis-trans isomerase

Up (4.24 ± 1.35)

Up (7.54 ± 1.21)

11

ompR gene product [Edwardsiella tarda EIB202]: osmolarity response regulator; cytoplasmic

Down (-∞)

Down (0.18 ± 0.04)

12

iscU gene product [Edwardsiella tarda EIB202]: FeS cluster assembly scaffold

Up (2.23 ± 0.62)

Unchanged

13

Uncharacterized membrane protein YqjD [Edwardsiella tarda FL6-60]

Down (0.25 ± 0.04)

Down (0.54 ± 0.05)

14

Putative iron-containing alcohol dehydrogenase [Edwardsiella tarda FL6-60]

Down (0.27 ± 0.06)

Unchanged

15

Cysteine synthase [Edwardsiella tarda C07-087]

Down (0.46 ± 0.05)

Down (0.33 ± 0.08)