From: Edwardsiella tarda Hfq: impact on host infection and global protein expression
Spot no.a | NCBI no. | Protein name | Abrr. | MASCOT scoreb | Theoretical pI/Mr (kD) | Coverage (%)c | Fold ratio wild type/wild type (mean ± SD)d |
---|---|---|---|---|---|---|---|
Translation | |||||||
1e | gi|269139520 | rpsA gene product [Edwardsiella tarda EIB202]: 30S ribosomal protein S1 | RpsA | 351 | 4.61/61.17 | 41.65 | 0.42 ± 0.05 |
3 | gi|18858425 | tuf2 gene product [Edwardsiella tarda EIB202]: elongation factor Tu | Tuf2 | 381 | 4.91/43.43 | 54.31 | 0.35 ± 0.09 |
6 | gi|269138094 | tsf gene product [Edwardsiella tarda EIB202]: translation elongation factor Ts | Tsf | 223 | 5.3/30.70 | 36.84 | 0.45 ± 0.07 |
Metabolism | |||||||
4 | gi|294637737 | Putative carbamoyltransferase YgeW [Edwardsiella tarda ATCC 23685] | YgeW | 65.1 | 6.07/44.38 | 17.97 | 0.21 ± 0.12 |
7 | gi|269138485 | Dyp-type peroxidase family protein [Edwardsiella tarda EIB202] |  | 260 | 5.76/33.27 | 38.46 | 3.62 ± 0.78 |
8 | gi|269140209 | ybaS gene product [Edwardsiella tarda EIB202]: glutaminase | YbaS | 362 | 4.83/33.06 | 81.35 | -∞ |
14 | gi|387866356 | Putative iron-containing alcohol dehydrogenase [Edwardsiella tarda FL6-60] |  | 218 | 5.73/42.61 | 74 | 0.27 ± 0.06 |
15 | gi|469762796 | Cysteine synthase [Edwardsiella tarda C07-087] |  | 199 | 6.03/33.99 | 77 | 0.46 ± 0.05 |
Transport | |||||||
5 | gi|387867244 | Mrp (Multiple resistance and pH adaptation) protein [Edwardsiella tarda FL6-60] | Mrp | 340 | 6.22/39.70 | 26.76 | 2.81 ± 1.11 |
Chaperones | |||||||
10 | gi|269140581 | fkpA gene product [Edwardsiella tarda EIB202]: FKBP-type peptidyl-prolyl cis-trans isomerase | FkpA | 425 | 8.7/28.76 | 58.39 | 4.24 ± 1.35 |
Membrane proteins | |||||||
11 | gi|269140620| | ompR gene product [Edwardsiella tarda EIB202]: osmolarity response regulator | OmpR | 127 | 6.31/27.41 | 38.91 | -∞ |
13 | gi|304557842 | Uncharacterized membrane protein YqjD [Edwardsiella tarda FL6-60] | YqjD | 600 | 6.26/10.94 | 82.18 | 0.25 ± 0.04 |
Cellular processes | |||||||
12 | gi|269140157 | iscU gene product [Edwardsiella tarda EIB202]: FeS cluster assembly scaffold | IscU | 102 | 4.74/13.86 | 55.47 | 2.23 ± 0.62 |
Unknown function and hypothetical protein | |||||||
2 | gi|269139286 | Hypothetical protein 1 [Edwardsiella tarda EIB202] |  | 153 | 5.64/58.02 | 29.04 | -∞ |
9 | gi|269140100 | Hypothetical protein 2 [Edwardsiella tarda EIB202] |  | 318 | 5.33/33.70 | 54.90 | 3.21 ± 1.28 |
16e | NA | NA | NA | NA | NA | NA | 5.21 ± 1.25 |
17 | NA | NA | NA | NA | NA | NA | 0.31 ± 0.05 |
18 | NA | NA | NA | NA | NA | NA | 2.94 ± 0.85 |
19 | NA | NA | NA | NA | NA | NA | 4.22 ± 1.77 |
20 | NA | NA | NA | NA | NA | NA | 0.32 ± 0.06 |