Table 5 Comparison of full-length nucleotide sequences of all eleven genomic segments between the Korean porcine K71 and the Korean bovine K5 strains, and between the Korean and other known strains.
Genomic segments | % nucleotide identities between | ||
|---|---|---|---|
K5 and K71 strains | K5 and other known strain | K71 and other known strain | |
(Strain exhibiting the highest identity) | (Strain exhibiting the highest identity) | ||
VP7 | 100 | 99.72 (OSU) | 99.72 (OSU) |
VP4 | 99.96 | 99.49 (OSU) | 99.53 (OSU) |
VP6 | 100 | 99.63 (JL94) | 99.63 (JL94) |
VP1 | 99.94 | 99.88 (OSU) | 99.88 (OSU) |
VP2 | 99.93 | 99.96 (OSU) | 99.89 (OSU) |
VP3 | 99.96 | 99.54 (OSU) | 99.62 (OSU) |
NSP1 | 100 | 99.62 (OSU) | 99.62 (OSU) |
NSP2 | 99.62 | 99.62 (OSU) | 99.43 (OSU) |
NSP3 | 99.81 | 96.84 (OSU) | 97.02 (OSU) |
NSP4 | 100 | 95.47 (RMC321) | 95.47 (RMC321) |
NSP5 | 99.85 | 98.80 (CH-1) | 99.95 (CH-1) |