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Table 2 Ranavirus sequence identity of the analyzed partial sequences of the MCP gene (502 nt) in %

From: Ranavirus infections associated with skin lesions in lizards

  ASRV DGRV ACRV IIRV PVRV FV3 SSTIV CH8/96 ESV/ECV RTV TRV
ASRV   98.0 99.6 96.4 98.0 99.6 99.4 98.2 96.4 98.2 98
DGRV 98.8   98.4 96.0 97.6 98.4 98.6 97.8 96 99.0 97.6
ACRV 100 98.8   96.8 98.4 100 99.8 98.6 96.8 98.6 98.4
IIRV 95.8 96.4 95.8   96.8 96.8 97.0 98.2 100 96.2 96.8
PVRV 98.2 98.2 98.2 95.2   98.4 98.6 97.8 96.8 97.8 100
FV3 100 98.8 100 95.8 98.2   99.8 98.6 96.8 98.6 98.4
SSTIV 99.4 99.4 99.4 96.4 98.8 99.4   98.8 97.0 98.8 98.6
CH8/96 97.6 97.6 97.6 98.2 97.0 97.6 98.2   98.2 98. 0 97.8
ESV/ECV 95.8 96.4 95.8 100 95.2 95.8 96.4 98.2   96.2 96.8
RTV 98.8 100 98.8 96.4 98.2 98.8 99.4 97.6 96.4   97.8
TRV 98.2 98.2 98.2 95.2 100 98.2 98.8 97.0 95.2 98.2  
  1. The five different lizard ranaviruses detected in this study are presented in comparison to other ranaviruses from amphians, reptiles and fish. The upper diagonal shows the values for the nucleotide sequence identity, the amino acid identity values are provided in the lower diagonal. Closest identities are highlighted in bold.
  2. ASRV = Anolis sagrei ranavirus, DGRV = Dopasia gracilis ranavirus, ACRV = Anolis carolinensis ranavirus, IIRV = Iguana iguana ranavirus, PVRV = Pogona vitticeps ranavirus, FV3 = Frog virus 3 [GenBank:AY548484], SSTIV = Soft-shelled turtle iridovirus [GenBank:EU627010], CH8/96 = Testudo hermanni ranavirus [GenBank:AF114154], ESV = European sheatfish virus [GenBank:JQ724856], ECV = European catfish virus [GenBank:FJ358608], RTV = Rana tigrina ranavirus [GenBank:AY033630], TRV = Tortoise ranaviruses (= isolates from Testudo marginata (CU60/09), Testudo hermanni (5187/07) and Testudo kleinmanni (882/96) [9]).