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Table 1 FMDV samples from the O/SEA/Mya98 lineage analysed in this study representing complete genomes (CG), S-fragments (S) and polyprotein open-reading frames (ORF) generated at the Pirbright Institute (PI) and the FGI Federal Centre for Animal Health (ARRIAH).

From: Multiple introductions of serotype O foot-and-mouth disease viruses into East Asia in 2010–2011

  Isolate Specimen Location Collection date Host species GenBank accession number (source laboratory for novel data)
CG O/MAY/7/2007 Cell culture Melaka, Malaysia 20/10/2007 Cattle HQ632772
CG O/TAI/22/2009 Fluid/cell culture Lamphun, Thailand 18/11/2009 Swine KF112879: This work (PI)
CG O/MYA/5/2009 Epithelial suspension Bago, Myanmar 10/06/2009 Cattle KF112880: This work (PI)
CG O/MOG/7/2010 Epithelial suspension Sukhbaatar Province. Mongolia 06/09/2010 Cattle KF112881: This work (PI)
CG O/MOG/C-10/2010 Cell culture Mongolia 01/05/2010 Cattle KF112882: This work (ARRIAH)
CG O/RUS/Jul 2010 Cell culture Abagaytuy, Zabajkal’skij Kray, Chita region, RF 05/07/2010 Swine KF112883: This work (ARRIAH)
CG O/RUS/Aug 2010 Cell culture Zabajkal’skij Kray, Chita region, RF 26/08/2010 Cattle KF112884: This work (ARRIAH)
CG O/JPN/1/2010 Cell culture Miyazaki Prefecture, Japan 17/04/2010 Cattle KF112885: This work (PI)
CG O/SKR/4/2010 Fluid/Vesicular Ganghwa, Incheon, ROK 07/04/2010 Cattle KF112886: This work (PI)
CG O/SKR/5/2010 Fluid vesicular Andong, Gyeongbuk, ROK 28/11/2010 Swine KF112887: This work (PI)
CG O/DRK/31/2011 Epithelial suspension Pyongan, DPRK 01/01/2011 Cattle KF112888: This work (PI)
CG O/BY/CHA/2010 Epithelial suspension Baiyun district, Guangzhou city, Guangdong, PRC 15/03/2010 Swine JN998085
CG O/GZ/CHA/2010 Epithelial suspension Guanzhou, Jiangxi, PRC 15/03/2010 Cattle JN998086
CG O/GSLX/2010 - Linxia, Gansu, PRC 30/06/2010 Swine JQ900581
CG O/CHN/Mya98/33-P Cell culture PRC 30/06/2010 Cattle JQ973889
CG O/HKN/15/2010 Epithelial suspension Hong Kong SAR 24/02/2010 Swine KF112889: This work (PI)
CG O/HKN/20/2010 Epithelial suspension Hong Kong SAR 03/03/2010 Swine HM229661: This work (PI)
S O/HKN/1/2010 Epithelial suspension Hong Kong SAR 05/02/2010 Swine KF112890: This work (PI)
S O/HKN/4/2010 Epithelial suspension Hong Kong SAR 10/02/2010 Swine KF112891: This work (PI)
S O/HKN/6/2010 Epithelial suspension Hong Kong SAR 10/02/2010 Swine KF112892: This work (PI)
S O/HKN/7/2010 Epithelial suspension Hong Kong SAR 22/02/2010 Swine KF112893: This work (PI)
S O/HKN/10/2010 Epithelial suspension Hong Kong SAR 24/02/2010 Swine KF112894: This work (PI)
S O/HKN/12/2010 Pericardial fluid Hong Kong SAR 24/02/2010 Swine KF112895: This work (PI)
S O/HKN/13/2010 Epithelial suspension Hong Kong SAR 24/02/2010 Swine KF112896: This work (PI)
S O/HKN/18/2010 Epithelial suspension Hong Kong SAR 01/03/2010 Swine KF112897: This work (PI)
S O/HKN/19/2010 Tissue Hong Kong SAR 03/03/2010 Swine KF112898: This work (PI)
ORF O/VN/YB105/2009 Cell culture Yen Bai, Vietnam 17/09/2009 Buffalo GU582115
ORF O/VN/QB88/2009 Cell culture Quang Binh, Vietnam 09/11/2009 Cattle GU125650
ORF O/VN/LC169/2009 - Lao Cai, Vietnam 15/11/2009 - DQ119643
ORF O/VN/GL13/2006 Cell culture Gia Lai, Vietnam 15/04/2006 Cattle GU125648
ORF O/VN/SL01/2006 Cell culture Son La, Vietnam 15/10/2006 Buffalo GU125649
ORF O/VN/SL21/2006 Cell culture Son La, Vietnam 15/10/2006 Cattle GU125647
ORF O/VN/SL22/2006 Cell culture Son La, Vietnam 15/10/2006 Cattle HM055510
ORF O/HLJOC12/2003 - Heilongjiang, PRC 30/06/2003 - DQ119643