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Table 1 Primers used for quantitative PCR

From: Antigen dose and humoral immune response correspond with protection for inactivated infectious pancreatic necrosis virus vaccines in Atlantic salmon (Salmo salar L)

Gene

GenBank

 

Sequence 5´-3´

Tm (°C)

Size (bp)

β-actin

BT047241.2

F

CCAGTCCTGCTCACTGAGGC

63.5

75bp

  

R

GGTCTCAAACATGATCTGGGTCA

63.5

 

ELFα

AF321836

F

GCTGTGCGTGACATGAGG

58.2

88bp

  

R

ACTTTGTGACCTTGCCGC

58.2

 

Mx (1)

SSU66475

F

TGCAACCACAGAGGCTTTGAA

57.9

78bp

  

R

GGCTTGGTCAGGATGCCTAAT

57.9

 

IFNα (2)

NM_001123570

F

TGGGAGGAGATATCACAAAGC

57.9

163bp

  

R

TCCCAGGTGACAGATTTCAT

57.9

 

ProbeIPNVsegB

AY379740

 

6FAM-CCGGATTCCTAGACGAC

  
  

F

GACTGGAGGTAAAAGGCATCGA

60.3

68bp

  

R

CCGAACTCCGACATGGTGTT

59.4