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Table 1 Primer pairs.

From: Diversity in bacterium-host interactions within the species Helicobacter heilmannii sensu stricto

 

Primers

Sequence (5’ → 3’)

Cytokines

IL-1β FW23

GGC AGG TGG TAT CGC TCA TC

IL-1β RV23

CAC CTT GGA TTT GAC TTC TA

IL-5 FW

AGA GAA GTG TGG CGA GGA GAG ACG

IL-5 RV

ACA GGG CAA TCC CTT CAT CGG

IL-6 FW

CAA AGC CAG AGC CAT TCA GAG

IL-6 RV

GCC ATT CCG TCT GTG ACT CCA GTT TCT CC

IL-10 FW

GGT TGC CAA GCC TTA TCA GA

IL-10 RV

GCT GCA TTC TGA GGG TCT TC

IL-12p40 FW

GAC ACG ACC TCC ACC AAA GT

IL-12p40 RV

CAT TCT GGG ACT GGA CCC TA

IL-17 FW23

AGC TCC AGA GGC CCT CGG AC

IL-17 RV23

AGG ACC AGG ATC TCT TGC TG

IFN-γ FW24

CCA TGA ACG CTA CAC ACT GCA TC

IFN-γ RV24

GAA GTA GAA AGA GAC AAT CTG G

TNF-α FW23

GCT CCC CCA GAA GTC GGC G

TNF-α RV23

CTT GGT GGT TGG GTA CGA CA

Gastrin

Gastrin FW25

GCC CTG GAA CCG CAA CA

Gastrin RV25

TTC TTG GAC AGG TCT GCT TTG AA

H + /K + ATPase (parietal cells)

ATP4b FW

GGG GGT AAC CTT GAG ACC TGA TG

ATP4b RV

AAG AAG TAC CTT TCC GAC GTG CAG

Reference genes

GAPDH FW26

AAC GGC ACA GTC AAG GCT GAG AAC G

GAPDH RV26

CAA CAT ACT CGG CAC CGG CAT CG

HPRT FW27

CTC ATG GAC TGA TTA TGG ACA G

HPRT RV27

AGC TGA GAG ATC ATC TCC ACC AAT

β-actin FW28

CCA AGG CCA ACC GCG AGA TGA C

β-actin RV28

AGG GTA CAT GGT GGT GCC GCC AGA C

  1. Primer pairs used for measuring the mRNA expression levels of IL-1β, IL-5, IL-6, IL-10, IL-12p40, IL-17, IFN-γ, TNF-α, gastrin and H+/K+ ATPase are shown. The housekeeping genes GAPDH, β-actin and HPRT were included as reference genes.