From: Chicken innate immune response to oral infection with Salmonella enterica serovar Enteritidis
Gene | Max NI# | Min NI | Max SE | Min SE | Max fold | WT fold | SPI1 fold |
---|---|---|---|---|---|---|---|
SE wt$ | 4 dpi& | 4 dpi& | |||||
MMP7 | 0.078 (12) | 0.001 (29) | 8.98 (5) | 0.001 (1) | 5952 (10) | 1578 | 35.2 |
IgG | 5.02 (25) | 0.006 (2) | 36.7 (25) | 0.009 (1) | 442 (10) | 33.2 | 1.63 |
IRG1 | 0.005 (2) | 0.001 (11) | 0.69 (5) | 0.003 (1) | 425 (7) | 222 | 4.61 |
SAA | 0.25 (2) | 0.018 (9) | 15.9 (5) | 0.065 (1) | 382 (5) | 106 | 5.02 |
ExFABP | 1.06 (18) | 0.150 (9) | 75.3 (5) | 0.369 (1) | 366 (5) | 56.8 | 4.80 |
IL-22 | 0.005 (12) | 0.0004 (10) | 0.39 (5) | 0.001 (1) | 355 (10) | 46.9 | 2.69 |
TRAP6 | 0.39 (2) | 0.011 (15) | 5.76 (5) | 0.029 (25) | 194 (5) | 37.3 | 2.19 |
MRP126 | 0.16 (2) | 0.003 (29) | 1.96 (5) | 0.018 (25) | 194 (11) | 14.3 | 2.11 |
IFNγ | 0.001 (18) | 0.0001 (11) | 0.035 (5) | 0.0002 (1) | 183 (11) | 62.8 | 1.39 |
IL1β | 0.018 (18) | 0.002 (1) | 0.74 (5) | 0.002 (1) | 134 (3) | 29.1 | 1.59 |
iNOS | 0.019 (1) | 0.008 (9) | 1.99 (7) | 0.019 (1) | 151 (7) | 47.9 | 2.84 |
ES1 | 2.06 (2) | 0.055 (29) | 39.6 (4) | 0.178 (1) | 139 (11) | 17.4 | 2.21 |
LYG2 | 0.26 (7) | 0.015 (22) | 5.82 (3) | 0.031 (25) | 130 (3) | 24.5 | 3.09 |
IFIT5 | 0.56 (12) | 0.003 (1) | 1.28 (3) | 0.003 (1) | 124 (3) | 42.4 | 2.62 |
IL-17 | 0.014 (2) | 0.0003 (29) | 0.095 (3) | 0.001 (22) | 120 (11) | 6.72 | 1.12 |
AVD | 2.07 (2) | 0.20 (29) | 103.1 (5) | 0.207 (1) | 116 (9) | 29.6 | 3.24 |
AH221 | 0.73 (18) | 0.12 (1) | 23.4 (5) | 0.119 (1) | 108 (5) | 42.9 | 1.90 |
serpin B | 0.096 (2) | 0.002 (29) | 0.54 (5) | 0.009 (25) | 101 (5) | 18.4 | 1.45 |
TGM4 | 0.092 (12) | 0.005 (6) | 0.92 (5) | 0.014 (1) | 68 (6) | 30.4 | 1.99 |
IgA | 6.04 (18) | 0.003 (2) | 23.4 (22) | 0.005 (3) | 49 (3) | 16.6 | 1.86 |
EPSTI1 | 0.39 (12) | 0.015 (1) | 0.74 (4) | 0.015 (1) | 33 (3) | 12.9 | 1.40 |
IL-8 | 0.15 (6) | 0.004 (29) | 1.08 (4) | 0.007 (1) | 31 (11) | 4.54 | 1.24 |
C3 | 0.092 (2) | 0.019 (10) | 0.78 (11) | 0.044 (1) | 29 (10) | 9.7 | 1.53 |
mucin-2 | 0.37 (3) | 0.018 (9) | 0.77 (4) | 0.124 (6) | 20 (11) | 1.01 | 0.94 |
PTGDS | 1.50 (9) | 0.12 (1) | 17.8 (5) | 0.117 (1) | 19 (5) | 14.9 | 1.70 |
ITGLB2 (CD18) | 0.084 (22) | 0.031 (3) | 0.46 (11) | 0.045 (18) | 14 (11) | 9.40 | 1.04 |
HPX | 0.19 (7) | 0.025 (12) | 0.91 (5) | 0.071 (25) | 13 (5) | 5.06 | 1.10 |
ASL2 | 0.46 (2) | 0.15 (29) | 2.26 (4) | 0.289 (1) | 11 (10) | 3.74 | 1.17 |
HCLS1 | 0.25 (29) | 0.088 (5) | 1.11 (10) | 0.107 (1) | 10 (11) | 5.41 | 1.13 |
TAP1 | 0.443 (22) | 0.087 (3) | 2.26 (7) | 0.104 (1) | 10 (4) | 13.7 | 1.37 |
STAT1 | 0.31 (12) | 0.059 (9) | 1.03 (3) | 0.164 (1) | 9.2 (9) | 8.61 | 1.25 |
RSFR | 0.96 (8) | 0.40 (1) | 7.19 (5) | 0.397 (1) | 9.1 (5) | 6.41 | 1.19 |
MEG1 | 0.49 (22) | 0.090 (3) | 1.80 (5) | 0.115 (1) | 7.0 (5) | 8.22 | 0.92 |
STAT3 | 0.64 (18) | 0.37 (3) | 1.28 (7) | 0.537 (5) | 2.2 (3) | 2.91 | 1.00 |
AQP8 | 33.4 (22) | 14.9 (1) | 17.6 (25) | 0.290 (5) | 97 (5) | 18.90 | 1.80 |
ADH1B | 9.46 (7) | 3.42 (2) | 4.66 (25) | 0.100 (5) | 75 (5) | 16.23 | 1.55 |
FABP1 | 6.11 (22) | 1.98 (11) | 8.48 (22) | 0.119 (5) | 47 (5) | 5.49 | 1.32 |
RALDH1 | 18.6 (22) | 9.17 (2) | 12.6 (1) | 0.404 (5) | 39 (5) | 12.87 | 1.43 |
unchar. oxidoreductase | 5.84 (12) | 0.80 (4) | 4.25 (22) | 0.192 (5) | 28 (5) | 7.14 | 1.26 |
CALB1 | 24.2 (1) | 8.20 (2) | 24.2 (1) | 0.785 (5) | 19 (5) | 13.78 | 1.88 |
ALDOB | 1.66 (22) | 0.32 (2) | 0.58 (22) | 0.037 (5) | 19 (10) | 6.71 | 0.99 |
SULT1C3 | 21.9 (4) | 7.20 (29) | 16.0 (1) | 1.081 (5) | 18 (5) | 8.04 | 1.86 |
HPGD | 4.62 (7) | 1.58 (1) | 2.77 (2) | 0.396 (5) | 10 (7) | 8.87 | 1.29 |