From: Ganjam virus/Nairobi sheep disease virus induces a pro-inflammatory response in infected sheep
Target | Primer sequences | Ta1 | [Primer]2 | Reference |
---|---|---|---|---|
NSDV/GV (F1/R1A) | TGACCATGCAGAACCAGATYG | 62 | 300nM | this paper |
GAAACAAGCCTCATGCTAACCT | Â | Â | Â | |
NSDV/GV (F2/R2) | GGAGAATGGCAAAGAGGTTGT | 64 | 300nM | this paper |
GTAAATCCGATTGGCAGTGAAG | Â | Â | Â | |
NSDV/GV F3b (RT primer) | GTCTTTGAACTYTGACCA | n/a | n/a | this paper |
IL-1β | CCTTGGGTATCAGGGACAA | 60 | 300nM | [16] |
TGCGTATGGCTTTCTTTAGG | Â | Â | Â | |
IL-4 | ACCTGTTCTGTGAATGAAGCCAA | 60 | 300nM | [17] |
CCCTCATAATAGTCTTTAGCCTTTCC | Â | Â | Â | |
IL-6 | TCCAGAACGAGTTTGAGG | 60 | 400nM | [16] |
CATCCGAATAGCTCTCAG | Â | Â | Â | |
IL-8 | ATGAGTACAGAACTTCGA | 57 | 300nM | [16] |
TCATGGATCTTGCTTCTC | Â | Â | Â | |
IL-10 | TGCTGTTGACCCAGTCTCTG | 60 | 200nM | this paper |
AGGGCAGAAAACGATGACAG | Â | Â | Â | |
IL-12A | TGGGCATTGTCTGTCTTCTG | 60 | 200nM | this paper |
TTCTTCCAGGGAGGGTTTCT | Â | Â | Â | |
IL-12B | GCTGGGAGTACCCTGACACG | 61 | 500nM | [17] |
GTGACTTTGGCTGAGGTTTGGTC | Â | Â | Â | |
IL-18 | ACTGTTCAGATAATGCACCCCAG | 60 | 300nM | [17] |
TTCTTACACTGCACAGAGATGGTTAC | Â | Â | Â | |
Interferon β | CCAGATGGTTCTCCTGCTGTGT | 63 | 300nM | this paper |
GACCAATACGGCATCTTCCTTC | Â | Â | Â | |
TNFα | GAATACCTGGACTATGCCGA | 60 | 200nM | [16] |
CCTCACTTCCCTACATCCCT | Â | Â | Â | |
TGFβ | GTGGACATCAACGGGTTCAG | 60 | 300nM | this paper |
TGTCCAGGCTCCAGATGTAG | Â | Â | Â | |
Interferon γ | CTCCGGCCTAACTCTCTCCT | 60 | 300nM | this paper |
AGGCCCACCCTTAGCTACAT | Â | Â | Â | |
GAPDH | GGTGATGCTGGTGCTGAGTA | 60 | 300nM | [16] |
TCATAAGTCCCTCCACGATG | Â | Â | Â | |
SDHA | ACCTGATGCTTTGTGCTCTGC | 60 | 200nM | [16] |
CCTGGACGGGCTTGGAGTAA | Â | Â | Â | |
G6PDH | CGAGGCTGTGTACACCAAGA | 60 | 300nM | this paper |
 | ATGTGGTGGAGCAGTGGAGT |  |  |  |