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Table 1 CSFV isolates selected from EURL virus database.

From: Improved strategy for phylogenetic analysis of classical swine fever virus based on full-length E2 encoding sequences

catalogue-no.1

isolate name

subgenotype

year of isolation

country

host2

GenBank acc. no.3

CSF0002

“Atzbuell”

2.3

1984

Germany

dp

JQ411559

CSF0014

 

2.2

1989

Germany

dp

JQ411560

CSF0021

 

2.1

1989

Germany

dp

JQ411561

CSF0073

 

2.2

1990

Austria

dp

JQ411562

CSF0083

“Rostock I”

2.3

1992

Germany

dp

JQ411563

CSF0104

“Diepholz I”

2.3

1994

Germany

dp

JQ411564

CSF0120

 

2.3

1994

Austria

wb

JQ411565

CSF0277

 

2.1

1997

Germany

dp

JQ411566

CSF0283

 

2.1

1997

The Netherlands

dp

JQ411567

CSF0290

 

2.3

1995

Poland

dp

JQ411568

CSF0291

 

2.3

1995

Poland

dp

JQ411569

CSF0306

 

1.3

1986

Malaysia

dp

JQ411570

CSF0309

“Kanagawa”

3.4

1974

Japan

dp

JQ411571

CSF0372

 

2.3

1996

Czech Republic

wb

JQ411572

CSF0378

 

2.2

1994

Czech Republic

dp

JQ411573

CSF0391

 

2.3

1997

Germany

dp

JQ411574

CSF0410

“Congenital Tremor”

outgroup

1964

Great Britain

dp

JQ411575

CSF0436

 

2.3

1995

Germany

dp

JQ411576

CSF0485

 

2.3

1997

Germany

wb

JQ411577

CSF0496

 

2.3

1982

Germany

dp

JQ411578

CSF0573

“Parma”

2.2

1998

Italy

dp

JQ411579

CSF0600

 

2.3

1998

Germany

wb

JQ411580

CSF0638

“Spante”

2.3

1998

Germany

wb

JQ411581

CSF0708

 

2.1

2000

Great Britain

dp

JQ411582

CSF0710

 

2.3

2000

Slovakia

wb

JQ411583

CSF0729

 

2.3

2000

Germany

wb

JQ411584

CSF0750

“Castellon”

2.3

2001

Spain

dp

JQ411585

CSF0867

 

2.3

2006

Croatia

dp

JQ411586

CSF0906

“Bergen”

2.2

unknown

The Netherlands

dp

JQ411587

CSF0947

“Brescia”

1.1

1951

Italy

dp

JQ411588

CSF1027

 

2.3

2007

Hungary

wb

JQ411589

CSF1032

 

2.3

2007

Slovakia

wb

JQ411590

CSF1048

“Panevezys”

2.1

2009

Lithuania

dp

JQ411591

  1. 1 All virus isolates were kindly provided by collaborating institutes, which are named as references in the CSF database and in the respective GenBank entries.
  2. 2 dp, domestic pig; wb, wild boar.
  3. 3 5´NTR-E2 sequences (3508–3510 nt).