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Table 1 Primer sequences and annealing temperatures of primer sets (°C), expected PCR fragment sizes (bp) and associated references.

From: Effect of Saccharomyces cerevisiae var. Boulardii and β-galactomannan oligosaccharide on porcine intestinal epithelial and dendritic cells challenged in vitro with Escherichia coli F4 (K88)

Genes

Sense

Antisense

T° Annealing

Product length

Accession

Number

Reference

APRIL

TGCTCACCCGTAAACAGAAG

TAAACTCCAGCATCCCAGAC

60

172

EST BP170456

[21]

BAFF

GAGAGCAGCTCCATTCAAAG

GCATGCCACTGTCTGCAATC

60

103

NM_001097498

[21]

CCL2

GTCACCAGCAGCAAGTGTC

CCAGGTGGCTTATGGAGTC

60

112

EF107669

[43]

CCL17

TGCTGCTCCTGGTTGCTCTC

ATGGCGTCCCTGGTACACTC

67

169

EST DB794536

[20]

CCL20

GCTCCTGGCTGCTTTGATGTC

CATTGGCGAGCTGCTGTGTG

66

146

NM 001024589

[21]

CCR7

AGGAGGCTCAAGACCATGAC

GATGCCGAAGATGAGTTTGC

62

147

AB090356

 

CXCL2

TGCTGCTCCTGCTTCTAGTG

TGGCTATGACTTCCGTTTGG

60

171

NM_001001861

[21]

GM-CSF

GAAACCGTAGACGTCGTCTG

GTGCTGCTCATAGTGCTTGG

62

150

DQ108393

[21]

HPRT1

GGACTTGAATCATGTTTGTG

CAGATGTTTCCAAACTCAAC

60

91

DQ815175

[24]

IL1α

CCCGTCAGGTCAATACCTC

GCAACACGGGTTCGTCTTC

60

170

NM 214029

[43]

IL6

ATCAGGAGACCTGCTTGATG

TGGTGGCTTTGTCTGGATTC

62

177

NM_214399

[43]

CXCL8

TCCTGCTTTCTGCAGCTCTC

GGGTGGAAAGGTGTGGAATG

62

100

NM_213867

[21]

IL10

GGTTGCCAAGCCTTGTCAG

AGGCACTCTTCACCTCCTC

60

202

NM_214041

[22]

RPL19

AACTCCCGTCAGCAGATCC

AGTACCCTTCCGCTTACCG

60

147

AF435591

[21]

TBP-1

AACAGTTCAGTAGTTATGAGCCAGA

AGATGTTCTCAAACGCTTCG

60

153

DQ845178

[24]

TGFβ

GAAGCGCATCGAGGCCATTC

GGCTCCGGTTCGACACTTTC

64

162

NM 214015

[21]

TLR4

TGTGCGTGTGAACACCAGAC

AGGTGGCGTTCCTGAAACTC

62

136

NM_001113039

[21]

TLR2

ACGGACTGTGGTGCATGAAG

GGACACGAAAGCGTCATAGC

62

101

NM_213761

[21]

TNFα

CCAATGGCAGAGTGGGTATG

TGAAGAGGACCTGGGAGTAG

62

116

X54859

[21]

  1. Reference genes are underlined