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Table 1 Identified SNPs within boTLR1 from Holstein Friesians.

From: Identification of single nucleotide polymorphisms in the bovine Toll-like receptor 1 gene and association with health traits in cattle

SNP Genomic (bta6) position Amino acid position Amino acid Restriction site presence Previously reported dbSNP ID
-1205A > G 60440366 - - - No -
-1151T > A 60440312 - - - No -
-79T > G 60439240 - - - No -
+798 C > T 60438363 266 Phe-Phe MboII Yes 1 ss73689409
+1641A > C 60437520 547 Ser-Ser Bst X-I Yes2 ss73689413
+1716 G > A 60437445 572 Lys-Lys Bsi Y Yes2 ss73689414
+1762A > G 60437324 587 Ile-Val Bcl I Yes2 ss73689415
+2100 C > T 60436989 700 Phe-Phe - Yes2 ss73689417
+2103 T > C 60436986 701 Val-Val BsmAI Yes2 ss73689418
+2463 C > T 60436698 - - MsII No -
+2731A > G 60436430 - - - No -
  1. Abbreviations: bta6 = Bos taurus chromosome 6, dbSNP = Single-Nucleotide Polymorphism Database [46]. All boTLR1 sequences were aligned with the published Btau_4.0 sequence NC_007304.4 (underlined allele denotes the published sequence). Light shading - synonymous coding SNPs, dark shading -non-synonymous coding SNP. All boTLR1 SNP offsets are given relative to their position (bp) from the A nucleotide of the first ATG codon. 1 [31], 2 [35].