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Table 1 Identified SNPs within boTLR1 from Holstein Friesians.

From: Identification of single nucleotide polymorphisms in the bovine Toll-like receptor 1 gene and association with health traits in cattle

SNP

Genomic (bta6) position

Amino acid position

Amino acid

Restriction site presence

Previously reported

dbSNP ID

-1205A > G

60440366

-

-

-

No

-

-1151T > A

60440312

-

-

-

No

-

-79T > G

60439240

-

-

-

No

-

+798 C > T

60438363

266

Phe-Phe

MboII

Yes 1

ss73689409

+1641A > C

60437520

547

Ser-Ser

Bst X-I

Yes2

ss73689413

+1716 G > A

60437445

572

Lys-Lys

Bsi Y

Yes2

ss73689414

+1762A > G

60437324

587

Ile-Val

Bcl I

Yes2

ss73689415

+2100 C > T

60436989

700

Phe-Phe

-

Yes2

ss73689417

+2103 T > C

60436986

701

Val-Val

BsmAI

Yes2

ss73689418

+2463 C > T

60436698

-

-

MsII

No

-

+2731A > G

60436430

-

-

-

No

-

  1. Abbreviations: bta6 = Bos taurus chromosome 6, dbSNP = Single-Nucleotide Polymorphism Database [46]. All boTLR1 sequences were aligned with the published Btau_4.0 sequence NC_007304.4 (underlined allele denotes the published sequence). Light shading - synonymous coding SNPs, dark shading -non-synonymous coding SNP. All boTLR1 SNP offsets are given relative to their position (bp) from the A nucleotide of the first ATG codon. 1 [31], 2 [35].