|
Functional Category
|
Gene Name
|
Clone/probe ID on KN511 cDNA array
|
EMBL acc. no.
|
Assay
|
|---|
|
Cytotoxicity
|
GNLY
|
C0009264H11.P1KAM13F
|
FE028690
|
W1
|
| |
CatC
|
sh1-aoo11_l0.s2
|
DY479012
|
W2
|
| |
GZMA
|
KN511_9486f02
|
FE037399
|
W2
|
| |
GZMB
|
KN511_9253n09
|
FE021442
|
W1
|
| |
GZMH
|
KN511_9260m05
|
FE026184
|
W2
|
|
Mucus composition
|
CLCA1
|
020502OAPP1012080HT OAPP
|
EE748540
|
W1
|
| |
ITLN1
|
-a
|
AM087961
|
W2
|
| |
ITLN2
|
KN511_9264a24.p1kaM13F
|
EF521881
|
W2
|
| |
ITLN3
|
-a
|
AM888394
|
W2
|
|
Heat shock response
|
HSPA8
|
KN511_9479o03
|
DY491193
|
W1
|
| |
HSPCA
|
KN511_9253c04
|
FE020983
|
W2
|
| |
ST1
|
KN511_9486e08
|
FE037366
|
W1
|
|
Proinflammatory response
|
PLA2G2A
|
KN511_9482g22
|
FE034658
|
W1
|
| |
CF1
|
KN511_9257m10
|
FE024140
|
W1
|
| |
CCL2
|
KN511_9477e07
|
FE031007
|
W1
|
|
Tissue remodelling
|
MMP13
|
KN511_9487m11.p1kM13F
|
AY091604
|
W1
|
| |
MMP23
|
sh1-bjd04_l0.s2
|
DY483383
|
W2
|
| |
CST3
|
KN511_9476g20
|
FE030675
|
W1
|
|
Digestion
|
LZM1A
|
KN511_9487n22.p1kM13Fb
|
M32492
|
W1
|
| |
LZM4A
|
KN511_9487n22.p1kM13Fb
|
M32497
|
W1
|
|
Unknown
|
MALAT
|
KN511_9484l14
|
FE036272
|
W1
|
|
"Housekeeping" genes
|
ATPase
|
KN511_9488b23.p1kM13F
|
X02813
|
W1/W2
|
| |
RW1
|
KN511_9261h17
|
FE026635
|
W1/W2
|
| |
TM57
|
KN511_9488i21
|
FE030125
|
W1/W2
|
- The EMBL accession no. for the sequences used to design multiplex competitive qRT-PCR assays (Sequenom® MassARRAY® System) is given, together with the representative probe on the ovine cDNA array. The two multiplex competitive qRT-PCR assays were designated W1 and W2 as indicated.
- aOnly ITLN2 was represented on the arrays.
- bThese cDNA probes would not be able to distinguish between LZM1A, 3A and 4A.
