Table 1 Sequences amplified for Neorickettsia.
Sample IDa | Location/Year | Fragment size (bp)b | Gene(s) amplifiedc | Accession no. |
|---|---|---|---|---|
PA-1 | Pennsylvania/2000 | 2091 | nsp2, nsp3 | HQ857586 |
| Â | Â | 765 | ssa1 (p) | HQ857584 |
| Â | Â | 1812 | ssa3 | HQ857585 |
Herodia | Pennsylvania/1999 | 673 | p51 (p) | HQ857589 |
| Â | Â | 2133 | nsp2, nsp3 | HQ857588 |
| Â | Â | 1460 | ssa3 | HQ857587 |
081 | Ohio/1991 | 2420 | nsp2, nsp3 | HQ857591 |
| Â | Â | 717 | ssa3 (p) | HQ857590 |
MN | Minnesota/2002 | 676 | p51 (p) | HQ857594 |
| Â | Â | 2156 | nsp2, nsp3 | HQ857593 |
| Â | Â | 1029 | ssa3 (p) | HQ857592 |
OV | Kentucky/1993 | 2103 | nsp2, nsp3 | HQ857596 |
| Â | Â | 863 | ssa3 | HQ857595 |
IA03-1 | Iowa/2003 | 1550 | nsp2 (p), nsp3 | HQ875741 |
IL01-1 | Illinois/2001 | 623 | nsp2 (p) | HQ875742 |
| Â | Â | 489 | nsp3 (p) | HQ875743 |
IN01-1 | Indiana/2001 | 1879 | nsp2 (p), nsp3 | HQ875744 |
IN02-1 | Indiana/2002 | 2052 | nsp2 (p), nsp3 | HQ875745 |
IN02-2 | Indiana/2002 | 542 | p51 (p) | HQ875747 |
| Â | Â | 733 | nsp3 (p) | HQ875746 |
IN03-1 | Indiana/2003 | 542 | p51 (p) | HQ906674 |
| Â | Â | 2110 | nsp2, nsp3 | HQ906673 |
IN03-2 | Indiana/2003 | 1361 | nsp2, nsp3 (p) | HQ906675 |
KY03-1 | Kentucky/2003 | 673 | p51 (p) | HQ906678 |
| Â | Â | 594 | p51 (p) | HQ906679 |
| Â | Â | 306 | p51 (p) | HQ906680 |
| Â | Â | 2095 | nsp2, nsp3 | HQ906677 |
| Â | Â | 1129 | ssa3 (p) | HQ906676 |
KY03-2 | Kentucky/2003 | 1398 | nsp2, nsp3 (p) | HQ906681 |
KY03-3 | Kentucky/2003 | 1042 | nsp2 (p), nsp3 (p) | HQ906682 |
OH07-1 | Ohio/2007 | 259 | p51 (p) | HQ906685 |
| Â | Â | 721 | ssa1 (p) | HQ906683 |
| Â | Â | 1739 | ssa3 | HQ906684 |
OH07-2 | Ohio/2007 | 259 | p51 (p) | HQ906686 |
OH07-3 | Ohio/2007 | 1558 | nsp2 (p), nsp3 (p) | HQ906688 |
| Â | Â | 995 | ssa3 (p) | HQ906687 |
OH07-4 | Ohio/2007 | 654 | p51 (p) | HQ906691 |
| Â | Â | 1118 | nsp2 (p), nsp3 (p) | HQ906690 |
| Â | Â | 1029 | ssa3 (p) | HQ906689 |
OH10-1 | Ohio/2010 | 768 | ssa3 (p) | HQ906692 |
OH10-2 | Ohio/2010 | 660 | p51 (p) | HQ906693 |
TN02-1 | Tennessee/2002 | 676 | p51 (p) | HQ906695 |
| Â | Â | 622 | p51 (p) | HQ906696 |
| Â | Â | 1893 | nsp2 (p), nsp3 | HQ906694 |
SF Oregon | Oregon/2004 | 1171 | nsp2 | HQ906697 |
| Â | Â | 842 | nsp3 | HQ906698 |
| Â | Â | 370 | ssa3 (p) | HQ906699 |