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Table 1 Quantification of viral RNA in tracheal and cloacal swabs

From: High interferon type I responses in the lung, plasma and spleen during highly pathogenic H5N1 infection of chicken

  

1 dpi

2 dpi

3 dpi

4 dpi

5 dpi

  

#1

#2

#3

#4

1

#2

#3

#4

#1

#2

#3

#4

#1

#2

#3

#4

#1

#2

#3

#4

Vac

Trachea

-

-

-

-

-

-

-

±

-

-

-

-

-

-

-

-

-

-

-

-

 

Cloaca

-

-

-

-

-

-

-

±

-

-

-

-

-

-

-

-

-

-

-

-

Yama-V/HA

Trachea

-

-

-

+

+

+

+

+

-

-

-

+

-

-

-

-

-

-

-

-

 

Cloaca

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

Yama

Trachea

++

++

++

++

 

 

Cloaca

++

++

++

++

Vac-Y/HA

Trachea

+

-

-

-

+

+

+

+

+

±

+

+

+

+

 

Cloaca

-

-

-

-

±

-

+

-

+

++

++

-

++

+

+++

+++

  1. - PCR negative; ± 45-Ct < 5; + 45-Ct 5-15; ++ 45-Ct 25-15; +++ 45-Ct > 25
  2. † animal dead