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Table 1 General statistics of the proportion of genotypes, NSP types and alleles in the 168 holdings included in the study

From: The impact of the genotype on the prevalence of classical scrapie at population level

  Mean % Median % Standard Deviation % Minimum % Maximum %
Genotypes      
ARR/ARR 31.2 31.5 11.8 0.0 72.0
ARR/ARQ 27.7 27.7 8.5 0.0 58.8
ARR/AHQ 10.8 10.2 6.7 0.0 39.1
ARR/ARH 3.3 1.1 4.7 0.0 21.4
AHQ/AHQ 1.2 0.7 1.7 0.0 12.3
AHQ/ARH 0.5 0.1 1.1 0.0 6.5
AHQ/ARQ 4.9 4.6 3.5 0.0 18.2
ARH/ARH 0.5 0.0 2.3 0.0 28.6
ARH/ARQ 1.5 0.4 2.4 0.0 12.2
ARQ/ARQ 9.0 6.6 11.4 0.0 94.7
ARR/VRQ 4.1 3.6 3.7 0.0 27.7
AHQ/VRQ 1.1 0.9 1.1 0.0 4.7
ARH/VRQ 0.4 0.0 1.3 0.0 14.3
ARQ/VRQ 3.2 2.4 3.4 0.0 22.1
VRQ/VRQ 0.3 0.1 0.7 0.0 5.4
NSP types      
Type I 31.2 31.5 11.8 0.0 72
Type II 41.8 42.3 9.3 0.0 68.1
Type III 17.8 15.6 12.6 0.0 94.7
Type IV 4.1 3.6 3.7 0.0 27.7
Type V 5.1 4.3 4.6 0.0 31
Alleles      
ARR 54.1 55.4 12.8 0.1 85.9
ARH 3.5 1 5.9 0.02 49.9
ARQ 27.7 25.6 12.4 6 97.1
AHQ 10 9.3 5.9 0.1 33.7
VRQ 4.7 4 3.6 0.1 29.5