Skip to main content

Table 1 Capsid proteins of AngHV-1 as identified by 1D gel/nanoLC-MS/MS in purified U capsids

From: Identification and localization of the structural proteins of anguillid herpesvirus 1

ORFa NCBI ID Bandb Descriptionc Predicted molecular mass (kDa) Number of peptidesd Mascot score CyHV-3e IcHV-1 RaHV-1 RaHV-2
36 282174073 4 Capsid triplex protein 2 40.2 91 3724 ORF72 ORF27 ORF95 ORF131
42 282174079 3 Capsid triplex protein 1 42.9 75 3288 ORF66    
48 282174085 2   102.6 52 2935     
57 282174094 5 Capsid protease-and-scaffolding protein 78.0 114 5037 ORF78 ORF28 ORF63 ORF88
100 282174137 -   61.1 9 381 ORF90 ORF37 ORF52 ORF78
104 282174141 1 Major capsid protein 139.9 537 26277 ORF92 ORF39 ORF54 ORF80
126 282174163 -   22.4 2 89     
  1. athe ORF are ordered by number, bband number refers to the capsid protein bands shown in Figure 1a, cproperties newly suggested in this paper are presented in italics, dnumber of peptides and Mascot score in the U capsid fraction, and ehomologous ORF in CyHV-3, IcHV-1, RaHV-1 and RaHV-2 are given, in case of marginal sequence identity (E-value > 10-5 in a BLAST search limited to members of the Alloherpesviridae family) presented in italics.