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Table 1 PRNP genotypes of scrapie positive and negative goats 1.

From: PRNP genetic variability and molecular typing of natural goat scrapie isolates in a high number of infected flocks

 

PRNP codon

 

Number of goats per genotype

PrP genotype

37

54-95

110

127

136

142

143

146

151

154

168

173

211

222

239

240

 

Scrapie positive

Scrapie negative

1

GG

5OR:5OR

TT

GG

AA

II

HH

NN

RR

RR

PP

SS

RR

QQ

SS

PP

 

44

12

2

GG

5OR:5OR

TT

GG

AA

II

HH

NN

RR

RR

PP

SS

RR

QQ

SS

PS

 

30

23

3

GG

5OR:5OR

TT

GG

AA

II

HH

NN

RR

RR

PP

SS

RR

QQ

SS

SS

 

9

3

4

GG

5OR:5OR

TT

GG

AA

ΙΙ

HH

ΝΝ

RR

‡RH

PP

SS

RR

QQ

SS

PS

 

4

3

5

GG

5OR:5OR

TT

GG

AA

ΙΙ

HH

ΝΝ

RR

‡RH

PP

SS

RR

QQ

SS

SS

 

2

2

6

GG

5OR:5OR

TT

GG

AA

II

HH

NN

RR

RR

PP

SS

RR

‡QK

SS

PS

 

1

2

7

GG

5OR:5OR

TT

‡GS

AA

‡IM

HH

NN

RR

RR

PP

SS

RR

QQ

SS

PP

 

1

1

8

GG

*5OR:4OR

TT

GG

AA

II

HH

NN

RR

RR

PP

SS

RR

QQ

SS

PP

 

3

 

9

GG

5OR:5OR

‡TP

GG

AA

II

HH

NN

RR

RR

PP

SS

RR

‡QK

SS

SS

 

3

 

10

GG

5OR:5OR

TT

GG

†AT

II

HH

NN

RR

RR

PP

SS

RR

QQ

SS

SS

 

1

 

11

GG

5OR:5OR

TT

GG

AA

II

HH

NN

RR

†RQ

PP

SS

RR

QQ

SS

PP

 

1

 

12

GG

5OR:5OR

TT

GG

AA

ΙΙ

HH

ΝΝ

‡RH

RR

PP

SS

RR

QQ

SS

PS

 

1

 

13

GG

5OR:5OR

TT

GG

AA

II

HH

NN

RR

RR

‡QQ

SS

RR

QQ

SS

PP

 

1

 

14

GG

5OR:5OR

TT

‡GS

AA

II

HH

NN

RR

‡RH

PP

SS

RR

QQ

SS

PS

 

1

 

15

GG

5OR:5OR

TT

GG

AA

‡IM

HH

NN

RR

RR

PP

SS

RR

QQ

SS

PS

 

1

 

16

GG

5OR:5OR

TT

GG

AA

II

HH

NN

RR

RR

PP

SS

RR

‡QK

SS

SS

 

1

 

17

GG

5OR:5OR

‡TP

GG

AA

ΙΙ

HH

ΝΝ

RR

RR

PP

SS

RR

QQ

SS

PS

  

5

18

GG

5OR:5OR

TT

GG

AA

II

HH

NN

RR

RR

‡PQ

SS

RR

QQ

SS

PS

  

3

19

GG

5OR:5OR

TT

GG

AA

II

HH

‡NS

RR

RR

PP

SS

RR

QQ

SS

PP

  

2

20

GG

5OR:5OR

TT

GG

AA

II

HH

‡NS

RR

RR

PP

SS

RR

QQ

SS

PS

  

2

21

GG

5OR:5OR

TT

GG

AA

II

HH

NN

RR

RR

‡PQ

SS

RR

QQ

SS

PP

  

2

22

GG

5OR:5OR

TT

‡GS

AA

II

HH

NN

RR

RR

PP

SS

RR

QQ

SS

PP

  

2

23

GG

5OR:5OR

TT

GG

AA

ΙΙ

HH

ΝΝ

RR

RR

PP

SS

‡RQ

‡QK

SS

SS

  

1

24

GG

*5OR:4OR

TT

GG

AA

II

HH

NN

RR

RR

PP

SS

RR

QQ

SS

PS

  

1

25

GG

5OR:5OR

TT

GG

AA

II

‡HR

NN

RR

‡RH

PP

SS

RR

QQ

SS

PS

  

1

26

GG

5OR:5OR

TT

GG

AA

II

‡HR

NN

RR

RR

PP

SS

RR

QQ

SS

PP

  

1

27

GG

5OR:5OR

TT

GG

AA

II

‡HR

NN

RR

RR

PP

SS

RR

QQ

SS

PS

  

1

28

GG

5OR:5OR

‡TP

GG

AA

ΙΙ

HH

ΝΝ

RR

RR

‡PQ

SS

RR

QQ

SS

PS

  

1

29

GG

5OR:5OR

TT

GG

AA

ΙΙ

HH

ΝΝ

RR

RR

PP

†SN

RR

QQ

SS

PP

  

1

30

GG

5OR:5OR

TT

GG

AA

II

HH

NN

RR

RR

PP

SS

RR

QQ

†FF

SS

  

1

31

GG

5OR:5OR

TT

GG

AA

II

HH

NN

RR

RR

‡PQ

‡SN

RR

QQ

SS

PP

  

1

32

GG

5OR:5OR

TT

GG

AA

II

HH

‡NS

RR

RR

‡PQ

SS

RR

QQ

SS

PP

  

1

33

GG

5OR:5OR

TT

GG

AA

II

HH

‡SS

RR

RR

PP

SS

RR

QQ

SS

PP

  

1

34

‡GV

5OR:5OR

TT

GG

AA

II

HH

NN

RR

RR

PP

SS

RR

QQ

SS

SS

  

1

35

‡GV

5OR:5OR

TT

‡GS

AA

II

HH

NN

RR

RR

PP

SS

RR

QQ

SS

PS

  

1

36

‡GV

5OR:5OR

TT

‡GS

AA

II

HH

NN

RR

RR

PP

SS

RR

QQ

SS

SS

  

1

37

‡GV

5OR:5OR

TT

GG

AA

II

HH

NN

RR

RR

PP

SS

RR

QQ

SS

PS

  

1

                 

Total (n)

104

77

  1. 1*5OR = five octapeptide repeats, 4OR = four octapeptide repeats, †: novel polymorphisms observed in goats, ‡: PRNP polymorphisms differing from the wild-type goat.