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Table 1 Primers used for gene amplification

From: Occludin and collagen IV degradation mediated by the T9SS effector SspA contributes to blood–brain barrier damage in ducks during Riemerella anatipestifer infection

Gene product (source)

Sequences

Product length (bp)

ZO-1 (duck)

F: 5ʹ-CCAGTAGCTCGACAGGAACC-3′

146

R: 5ʹ-CTTGCGCTTCGGTCTCTTAC-3′

Occludin (duck)

F: 5′-AATTCGACACCGACCTCAAG-3′

254

R: 5′-CTTGTCGTAGTCGCTCACCA-3′

Laminin-α4 (duck)

F:5′-TGCACACAACCTACGAGGAC-3′

188

R: 5′-CAGCAGCATCATTGACACGG-3′

IL-β1 (duck)

F:5′-TCATCTTCTACCGCCTGGAC-3′

244

R: 5′-GTAGGTGGCGATGTTGACCT-3′

IL-6 (duck)

F:5′-TTCGACGAGGAGAAATGCTT-3′

150

R: 5′-CCTTATCGTCGTTGCCAGAT-3′

IL-8 (duck)

F:5′-TGGTAAGGATGGGAAACGAG-3′

211

R: 5′-TTGGCCAGAATTGCCTTTAC-3′

IL-10 (duck)

F:5′-CTGACCTCCTACCAGCGAAG-3′

179

R: 5′-CTCCATGTAGAACCGCATCA-3′

IL-17A (duck)

F:5′-TGCCTACGGGAAGGTGATAC-3′

211

R: 5′-GTGGTCCTCATCGATCCTGT-3′

IL-17RA (duck)

F:5′-CAAGTCCGCATCTCTCACAA-3′

171

R: 5′-ATTTGGTACCGCGTTGACTC-3′

CCL3 (duck)

F:5′-CTTTGCTACGAGAACCTGGC-3′

249

R: 5′-CTAGCTGGGGATGGAGAAGG-3′

CCL4 (duck)

F:5′-GCTCTTCTCCTCATTGCAGC-3′

212

R: 5′-CAGGTGTCACTTGGATTGGC-3′

CCL5 (duck)

F:5′-CTGTGGCCCATCTTGACAAC-3′

202

R: 5′-TCAAAGTGCTTCAGGTGTGC-3′

CCR5 (duck)

F:5′-TGGGCCTACTATGCTGTTCA-3′

230

R: 5′-GGAACAGAGGCAAGCATAGC-3′

CX3CL1 (duck)

F:5′-AGCAGCAGTTCCAGAAAAGC-3′

162

R: 5′-TTGCTGGTCACCTCTGTCAT-3′

TNFSF13β (duck)

F:5′-TGATGACGAGAAAGCAGGTG-3′

189

R: 5′-AAGCAGGCCTGTAGCACTGT-3′

ITGβ2 (duck)

F:5′-AATTCAGGCTACACGGGGAA-3′

175

R: 5′-CGTAGATCTGCTTGTTGGGC-3′

PECAM-1 (duck)

F:5′-GTGGGACTGCTTTTCTCTGC-3′

212

R: 5′-TGGATGGCTTTTCACATTCA-3′

VCAM-1 (duck)

F:5′-TTCCTTCTGATCGCCTGGAA-3′

239

R: 5′-TGGGCCAAAGTTTGCATTCA-3′

SELE (duck)

F:5′-CCGCAACCATAACGCTAAGT-3′

206

R: 5′-CCTCATTTCCATTGCCATTT-3′

SELP (duck)

F:5′-CTGCCGCCTTCTTAAAGCAA-3′

177

R: 5′-TGGTGAAGATGCCTGGTGAT-3′

β-Actin (duck)

F:5′-GAGAAATTGTGCGTGACATCA-3′

153

R: 5′-CCTGAACCTCTCATTGCCA-3′

Occludin (duck)

F:5′-TAGTCCAGTGTGGTGGAATTATGTTCAGCAAGAAGTCCTA-3′

1524

R: 5′-GCTGGATATCTGCAGAATTCACCCCGCACCTTGTCGTAG-3′

sspA (R. anatipestifer)

F:5′-TGAACCGTCAGAATTAAGCTTATGAAGAAGATCATCTTTGT-3′

2130

R: 5′-GAATTCGCGGCCGCAAGCTTCTTCTTGATGAACTTCTTAG-3′

Claudin-5 (bEnd.3)

F: 5′-CGCTTGTGGCACTCTTTGT-3′

168

R: 5′-ACTCCCGGACTACGATGTTG-3′

JAM2 (bEnd.3)

F: 5′-CTAGTGGCTCCTGCTGTTCC-3′

108

R: 5′-GTACTCCGGAGCTGGGTTTC-3′

VCAM-1 (bEnd.3)

F: 5′-ATTTTCTGGGGCAGGAAGTT-3′

179

R:5′-ACGTCAGAACAACCGAATCC-3′

SELE (bEnd.3)

F: 5′-ACACATCTGGTGGCAATTCA-3′

211

R:5′-TGTTGTTTGGTTCACCTGGA-3′

β-Actin (bEnd.3)

F: 5′-AGCCATGTACGTAGCCATCC-3′

228

R:5′-CTCTCAGCTGTGGTGGTGAA-3′