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Table 2 Deer diploid genotypes in relation to published reference sequence (Genbank Accession #AF156185).

From: White-tailed deer are susceptible to the agent of sheep scrapie by intracerebral inoculation

Codon

65

95

96

116

138

146

185

226

PRNPψ

Animal ID

         

Ref

GG

QQ

GG

AA

SS

NN

II

QQ

NE

1

GG

QQ

GS

AA

SS

NN*

II*

QQ

-

2

GG

QQ

GS

AA

SS

NN*

II*

QQ

+

3

GG

QQ

SS

AA

SS

NN*

II*

QQ

-

4

GG

QQ

GS

AA

SS

NN*

II*

QQ

-

5

GG

QQ

SS

AA

SS

NN*

II*

QQ

-

6

GG

QQ

SS

AA

SS

NN*

II*

QQ

-

  1. Polymorphisms were present at codon 96 including GS and SS genotypes, but other loci were the same as the published consensus sequence.
  2. PRNPψ denotes the prion precursor protein pseudogene; Ref = Genbank AF156185.
  3. A = alanine, G = Glycine, I = isoleucine, N = asparagine, S = serine, Q = glutamine, NE: not examined.
  4. *Denotes silent change aat/aac at codon 146 and atc/att at codon 185.